BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025C05SP1|AL428352
(859 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1697 1678 0.0
>3x_Contig1697
Length = 16220
Score = 1678 bits (846), Expect = 0.0
Identities = 857/860 (99%), Gaps = 1/860 (0%)
Strand = Plus / Minus
Query: 1 actaaaataaaacgaaagtgcgccagtagaaaaataaaaaaagagaagtcggatattgta 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12889 actaaaataaaacgagagtgcgccagtagaaaaataaaaaaagagaagtcggatattgta 12830
Query: 61 aaataatcaacttgcagggatcaatttgatggttgaatagttagttctacgcgatagggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12829 aaataatcaacttgcagggatcaatttgatggttgaatagttagttctacgcgatagggc 12770
Query: 121 gagaaactacctcaattttgataaggatatgtcttaacgagtctcaagaggaaacaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12769 gagaaactacctcaattttgataaggatatgtcttaacgagtctcaagaggaaacaaaaa 12710
Query: 181 gaaacagaaacagataaggaggcagaaaaaaacgatagcacttccctatgacccgtagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12709 gaaacagaaacagataaggaggcagaaaaaaacgatagcacttccctatgacccgtagca 12650
Query: 241 tcaaagacaatacttttgactcattttagtaaccgtttaggacggacataaacaccaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12649 tcaaagacaatacttttgactcattttagtaaccgtttaggacggacataaacaccaagg 12590
Query: 301 ggtatatcctgcgtacgggttcttcaagggaatgaaatcaaaagaaaaaaaaacttgaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12589 ggtatatcctgcgtacgggttcttcaagggaatgaaatcaaaagaaaaaaaaacttgaat 12530
Query: 361 agaaaacttccagatcaattcttgacgaatgtgagggcattaatgttttgacacctgcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12529 agaaaacttccagatcaattcttgacgaatgtgagggcattaatgttttgacacctgcct 12470
Query: 421 gagtatactgtagggatcctttttttttttatttttatgttcttcttattcttttttttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12469 gagtatactgtagggatcctttttttttttatttttatgttcttcttattcttttttttt 12410
Query: 481 tttagaagatttccagggtttttctgccgatgcgtcgatcaacgactggtatcaacatcg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12409 tttagaagatttccagggtttttctgccgatgcgtcgatcaacgactggtatcaacatcg 12350
Query: 541 acggacctggaatcaacttcatacctgaatggcaatagaacagatagagatcaagttttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12349 acggacctggaatcaacttcatacctgaatggcaatagaacagatagagatcaagttttg 12290
Query: 601 aattttttttgtttttatttcgttctttctttaccgttcatctatgagattctgtcgtca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12289 aattttttttgtttttatttcgttctttctttaccgttcatctatgagattctgtcgtca 12230
Query: 661 ttcaatagataccaccgtgtaaatcatcaaatgaaaactgggtatcgtttgaatcattgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12229 ttcaatagataccaccgtgtaaatcatcaaatgaaaactgggtatcgtttgaatcattgg 12170
Query: 721 gctcatggactgaaatgttattaccattagcagtcaatttaatctgtgggacagttgga- 779
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12169 gctcatggactgaaatgttattaccattagcagtcaatttaatctgtgggacagttggac 12110
Query: 780 catgaagaatacggtaatcgttgaattgatcttcatcttgttcatctagtttgaatctgt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12109 catgaagaatacggtaatcgttgaattgatcttcatcttgttcatctagtttgaatctgt 12050
Query: 840 ttagattattytctacctgc 859
|||||||||| |||||||||
Sbjct: 12049 ttagattattttctacctgc 12030
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 21,567
Number of Sequences: 1807
Number of extensions: 21567
Number of successful extensions: 877
Number of sequences better than 1.0e-20: 1
length of query: 859
length of database: 10,358,551
effective HSP length: 16
effective length of query: 843
effective length of database: 10,329,639
effective search space: 8707885677
effective search space used: 8707885677
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)